Installation check
- [X] I have read the installation guide.
Platform
'Linux-4.9.117+-aarch64-with-libc'
Installation Method
pip install
pandas Version
Latest
Python Version
Latest
Installation Logs
I can install numpy in isolation, but when I try to install pandas it throws the error for the numpy, even though it's already installed.
`raise systemerror("one of the required function to build numpy is not" systemerror: one of the required function to build numpy is not available (the list is ['sin', 'cos', 'tan', 'sinh', 'cosh', 'tanh', 'fabs', 'floor', 'ceil', 'sqrt', 'log10', 'log', 'exp', 'asin', 'acos', 'atan', 'fmod', 'modf', 'frexp', 'ldexp', 'expm1', 'log1p', 'acosh', 'asinh', 'atanh', 'rint', 'trunc', 'exp2', 'copysign', 'nextafter', 'strtoll', 'strtoull', 'cbrt', 'log2', 'pow', 'hypot', 'atan2', 'creal', 'cimag', 'conj']).
Comment From: MarcoGorelli
can you show your complete traceback and the exact command you ran please?
Comment From: saalimzafar
~ $ pip list
Package Version
--------------- -------
contourpy 1.0.7
cycler 0.11.0
Cython 0.29.33
distlib 0.3.6
filelock 3.9.0
fonttools 4.38.0
kiwisolver 1.4.4
matplotlib 3.6.3
numpy 1.23.2
packaging 23.0
Pillow 9.4.0
pip 22.3.1
platformdirs 2.6.2
pyparsing 3.0.9
python-dateutil 2.8.2
six 1.16.0
virtualenv 20.17.1
~ $ pip install pandas
Collecting pandas
Using cached pandas-1.5.3.tar.gz (5.2 MB)
^C
ERROR: Operation cancelled by user
~ $
~ $
~ $
~ $ rm -R .cache/
~ $ pip install pandas
Collecting pandas
Downloading pandas-1.5.3.tar.gz (5.2 MB)
━━━━━━━━━━━━━━━ 5.2/5.2 MB 864.4 kB/s eta 0:00:00
Installing build dependencies ... error
error: subprocess-exited-with-error
× pip subprocess to install build dependencies did not run successfully.
│ exit code: 1
╰─> [246 lines of output]
Collecting setuptools>=51.0.0
Downloading setuptools-66.1.1-py3-none-any.whl (1.3 MB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.3/1.3 MB 899.8 kB/s eta 0:00:00
Collecting wheel
Downloading wheel-0.38.4-py3-none-any.whl (36 kB)
Collecting Cython<3,>=0.29.32
Downloading Cython-0.29.33-py2.py3-none-any.whl (987 kB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 987.3/987.3 kB 1.2 MB/s eta 0:00:00
Collecting oldest-supported-numpy>=2022.8.16
Downloading oldest_supported_numpy-2022.11.19-py3-none-any.whl (4.9 kB)
Collecting numpy==1.23.2
Downloading numpy-1.23.2.tar.gz (10.7 MB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 10.7/10.7 MB 950.2 kB/s eta 0:00:00
Installing build dependencies: started
Installing build dependencies: finished with status 'done'
Getting requirements to build wheel: started
Getting requirements to build wheel: finished with status 'done'
Preparing metadata (pyproject.toml): started
Preparing metadata (pyproject.toml): finished with status 'done'
Building wheels for collected packages: numpy
Building wheel for numpy (pyproject.toml): started
Building wheel for numpy (pyproject.toml): still running...
Building wheel for numpy (pyproject.toml): finished with status 'error'
error: subprocess-exited-with-error
× Building wheel for numpy (pyproject.toml) did not run successfully.
│ exit code: 1
╰─> [212 lines of output]
setup.py:71: RuntimeWarning: NumPy 1.23.2 may not yet support Python 3.11.
warnings.warn(
Running from numpy source directory.
setup.py:86: DeprecationWarning:
`numpy.distutils` is deprecated since NumPy 1.23.0, as a result
of the deprecation of `distutils` itself. It will be removed for
Python >= 3.12. For older Python versions it will remain present.
It is recommended to use `setuptools < 60.0` for those Python versions.
For more details, see:
https://numpy.org/devdocs/reference/distutils_status_migration.html
import numpy.distutils.command.sdist
Processing numpy/random/_bounded_integers.pxd.in
Processing numpy/random/_bounded_integers.pyx.in
Processing numpy/random/_common.pyx
Processing numpy/random/_generator.pyx
Processing numpy/random/_mt19937.pyx
Processing numpy/random/_pcg64.pyx
Processing numpy/random/_philox.pyx
Processing numpy/random/_sfc64.pyx
Processing numpy/random/bit_generator.pyx
Processing numpy/random/mtrand.pyx
Cythonizing sources
INFO: blas_opt_info:
INFO: blas_armpl_info:
INFO: customize UnixCCompiler
INFO: libraries armpl_lp64_mp not found in ['/data/data/com.termux/files/usr/lib']
INFO: NOT AVAILABLE
INFO:
INFO: blas_mkl_info:
INFO: libraries mkl_rt not found in ['/data/data/com.termux/files/usr/lib']
INFO: NOT AVAILABLE
INFO:
INFO: blis_info:
INFO: libraries blis not found in ['/data/data/com.termux/files/usr/lib']
INFO: NOT AVAILABLE
INFO:
INFO: openblas_info:
INFO: C compiler: aarch64-linux-android-clang -DNDEBUG -g -fwrapv -O3 -Wall -fstack-protector-strong -O3 -fstack-protector-strong -O3 -fPIC
creating /data/data/com.termux/files/usr/tmp/tmpjszqmbya/data
creating /data/data/com.termux/files/usr/tmp/tmpjszqmbya/data/data
creating /data/data/com.termux/files/usr/tmp/tmpjszqmbya/data/data/com.termux
creating /data/data/com.termux/files/usr/tmp/tmpjszqmbya/data/data/com.termux/files
creating /data/data/com.termux/files/usr/tmp/tmpjszqmbya/data/data/com.termux/files/usr
creating /data/data/com.termux/files/usr/tmp/tmpjszqmbya/data/data/com.termux/files/usr/tmp
creating /data/data/com.termux/files/usr/tmp/tmpjszqmbya/data/data/com.termux/files/usr/tmp/tmpjszqmbya
INFO: compile options: '-c'
INFO: aarch64-linux-android-clang: /data/data/com.termux/files/usr/tmp/tmpjszqmbya/source.c
INFO: aarch64-linux-android-clang /data/data/com.termux/files/usr/tmp/tmpjszqmbya/data/data/com.termux/files/usr/tmp/tmpjszqmbya/source.o -L/data/data/com.termux/files/usr/lib -lopenblas -o /data/data/com.termux/files/usr/tmp/tmpjszqmbya/a.out
INFO: FOUND:
INFO: libraries = ['openblas', 'openblas']
INFO: library_dirs = ['/data/data/com.termux/files/usr/lib']
INFO: language = c
INFO: define_macros = [('HAVE_CBLAS', None)]
INFO:
INFO: FOUND:
INFO: libraries = ['openblas', 'openblas']
INFO: library_dirs = ['/data/data/com.termux/files/usr/lib']
INFO: language = c
INFO: define_macros = [('HAVE_CBLAS', None)]
INFO:
non-existing path in 'numpy/distutils': 'site.cfg'
INFO: lapack_opt_info:
INFO: lapack_armpl_info:
INFO: libraries armpl_lp64_mp not found in ['/data/data/com.termux/files/usr/lib']
INFO: NOT AVAILABLE
INFO:
INFO: lapack_mkl_info:
INFO: libraries mkl_rt not found in ['/data/data/com.termux/files/usr/lib']
INFO: NOT AVAILABLE
INFO:
INFO: openblas_lapack_info:
INFO: C compiler: aarch64-linux-android-clang -DNDEBUG -g -fwrapv -O3 -Wall -fstack-protector-strong -O3 -fstack-protector-strong -O3 -fPIC
creating /data/data/com.termux/files/usr/tmp/tmpfy4vjky2/data
creating /data/data/com.termux/files/usr/tmp/tmpfy4vjky2/data/data
creating /data/data/com.termux/files/usr/tmp/tmpfy4vjky2/data/data/com.termux
creating /data/data/com.termux/files/usr/tmp/tmpfy4vjky2/data/data/com.termux/files
creating /data/data/com.termux/files/usr/tmp/tmpfy4vjky2/data/data/com.termux/files/usr
creating /data/data/com.termux/files/usr/tmp/tmpfy4vjky2/data/data/com.termux/files/usr/tmp
creating /data/data/com.termux/files/usr/tmp/tmpfy4vjky2/data/data/com.termux/files/usr/tmp/tmpfy4vjky2
INFO: compile options: '-c'
INFO: aarch64-linux-android-clang: /data/data/com.termux/files/usr/tmp/tmpfy4vjky2/source.c
INFO: aarch64-linux-android-clang /data/data/com.termux/files/usr/tmp/tmpfy4vjky2/data/data/com.termux/files/usr/tmp/tmpfy4vjky2/source.o -L/data/data/com.termux/files/usr/lib -lopenblas -o /data/data/com.termux/files/usr/tmp/tmpfy4vjky2/a.out
INFO: FOUND:
INFO: libraries = ['openblas', 'openblas']
INFO: library_dirs = ['/data/data/com.termux/files/usr/lib']
INFO: language = c
INFO: define_macros = [('HAVE_CBLAS', None)]
INFO:
INFO: FOUND:
INFO: libraries = ['openblas', 'openblas']
INFO: library_dirs = ['/data/data/com.termux/files/usr/lib']
INFO: language = c
INFO: define_macros = [('HAVE_CBLAS', None)]
INFO:
Warning: attempted relative import with no known parent package
/data/data/com.termux/files/usr/lib/python3.11/distutils/dist.py:274: UserWarning: Unknown distribution option: 'define_macros'
warnings.warn(msg)
running bdist_wheel
running build
running config_cc
INFO: unifing config_cc, config, build_clib, build_ext, build commands --compiler options
running config_fc
INFO: unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
running build_src
INFO: build_src
INFO: building py_modules sources
creating build
creating build/src.linux-aarch64-3.11
creating build/src.linux-aarch64-3.11/numpy
creating build/src.linux-aarch64-3.11/numpy/distutils
INFO: building library "npymath" sources
WARN: Could not locate executable armflang
WARN: Could not locate executable gfortran
WARN: Could not locate executable f95
WARN: Could not locate executable ifort
WARN: Could not locate executable ifc
WARN: Could not locate executable lf95
WARN: Could not locate executable pgfortran
WARN: Could not locate executable nvfortran
WARN: Could not locate executable f90
WARN: Could not locate executable f77
WARN: Could not locate executable fort
WARN: Could not locate executable efort
WARN: Could not locate executable efc
WARN: Could not locate executable g77
WARN: Could not locate executable g95
WARN: Could not locate executable pathf95
WARN: Could not locate executable nagfor
WARN: Could not locate executable frt
WARN: don't know how to compile Fortran code on platform 'posix'
creating build/src.linux-aarch64-3.11/numpy/core
creating build/src.linux-aarch64-3.11/numpy/core/src
creating build/src.linux-aarch64-3.11/numpy/core/src/npymath
INFO: conv_template:> build/src.linux-aarch64-3.11/numpy/core/src/npymath/npy_math_internal.h
INFO: adding 'build/src.linux-aarch64-3.11/numpy/core/src/npymath' to include_dirs.
INFO: conv_template:> build/src.linux-aarch64-3.11/numpy/core/src/npymath/ieee754.c
INFO: conv_template:> build/src.linux-aarch64-3.11/numpy/core/src/npymath/npy_math_complex.c
INFO: None - nothing done with h_files = ['build/src.linux-aarch64-3.11/numpy/core/src/npymath/npy_math_internal.h']
INFO: building library "npyrandom" sources
INFO: building extension "numpy.core._multiarray_tests" sources
creating build/src.linux-aarch64-3.11/numpy/core/src/multiarray
INFO: conv_template:> build/src.linux-aarch64-3.11/numpy/core/src/multiarray/_multiarray_tests.c
INFO: building extension "numpy.core._multiarray_umath" sources
Traceback (most recent call last):
File "/data/data/com.termux/files/usr/lib/python3.11/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 351, in <module>
main()
File "/data/data/com.termux/files/usr/lib/python3.11/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 333, in main
json_out['return_val'] = hook(**hook_input['kwargs'])
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/data/data/com.termux/files/usr/lib/python3.11/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 249, in build_wheel
return _build_backend().build_wheel(wheel_directory, config_settings,
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/data/data/com.termux/files/usr/tmp/pip-build-env-pic4lbzy/overlay/lib/python3.11/site-packages/setuptools/build_meta.py", line 230, in build_wheel
return self._build_with_temp_dir(['bdist_wheel'], '.whl',
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/data/data/com.termux/files/usr/tmp/pip-build-env-pic4lbzy/overlay/lib/python3.11/site-packages/setuptools/build_meta.py", line 215, in _build_with_temp_dir
self.run_setup()
File "/data/data/com.termux/files/usr/tmp/pip-build-env-pic4lbzy/overlay/lib/python3.11/site-packages/setuptools/build_meta.py", line 268, in run_setup
self).run_setup(setup_script=setup_script)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/data/data/com.termux/files/usr/tmp/pip-build-env-pic4lbzy/overlay/lib/python3.11/site-packages/setuptools/build_meta.py", line 158, in run_setup
exec(compile(code, __file__, 'exec'), locals())
File "setup.py", line 493, in <module>
setup_package()
File "setup.py", line 485, in setup_package
setup(**metadata)
File "/data/data/com.termux/files/usr/tmp/pip-install-xi3cfept/numpy_dfa42af7522a4fafb45d09a794b79d4c/numpy/distutils/core.py", line 169, in setup
return old_setup(**new_attr)
^^^^^^^^^^^^^^^^^^^^^
File "/data/data/com.termux/files/usr/tmp/pip-build-env-pic4lbzy/overlay/lib/python3.11/site-packages/setuptools/__init__.py", line 153, in setup
return distutils.core.setup(**attrs)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/data/data/com.termux/files/usr/lib/python3.11/distutils/core.py", line 148, in setup
dist.run_commands()
File "/data/data/com.termux/files/usr/lib/python3.11/distutils/dist.py", line 966, in run_commands
self.run_command(cmd)
File "/data/data/com.termux/files/usr/lib/python3.11/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/data/data/com.termux/files/usr/tmp/pip-build-env-pic4lbzy/overlay/lib/python3.11/site-packages/wheel/bdist_wheel.py", line 299, in run
self.run_command('build')
File "/data/data/com.termux/files/usr/lib/python3.11/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/data/data/com.termux/files/usr/lib/python3.11/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/data/data/com.termux/files/usr/tmp/pip-install-xi3cfept/numpy_dfa42af7522a4fafb45d09a794b79d4c/numpy/distutils/command/build.py", line 62, in run
old_build.run(self)
File "/data/data/com.termux/files/usr/lib/python3.11/distutils/command/build.py", line 135, in run
self.run_command(cmd_name)
File "/data/data/com.termux/files/usr/lib/python3.11/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/data/data/com.termux/files/usr/lib/python3.11/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/data/data/com.termux/files/usr/tmp/pip-install-xi3cfept/numpy_dfa42af7522a4fafb45d09a794b79d4c/numpy/distutils/command/build_src.py", line 144, in run
self.build_sources()
File "/data/data/com.termux/files/usr/tmp/pip-install-xi3cfept/numpy_dfa42af7522a4fafb45d09a794b79d4c/numpy/distutils/command/build_src.py", line 161, in build_sources
self.build_extension_sources(ext)
File "/data/data/com.termux/files/usr/tmp/pip-install-xi3cfept/numpy_dfa42af7522a4fafb45d09a794b79d4c/numpy/distutils/command/build_src.py", line 318, in build_extension_sources
sources = self.generate_sources(sources, ext)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/data/data/com.termux/files/usr/tmp/pip-install-xi3cfept/numpy_dfa42af7522a4fafb45d09a794b79d4c/numpy/distutils/command/build_src.py", line 378, in generate_sources
source = func(extension, build_dir)
^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/data/data/com.termux/files/usr/tmp/pip-install-xi3cfept/numpy_dfa42af7522a4fafb45d09a794b79d4c/numpy/core/setup.py", line 513, in generate_config_h
check_math_capabilities(config_cmd, ext, moredefs, mathlibs)
File "/data/data/com.termux/files/usr/tmp/pip-install-xi3cfept/numpy_dfa42af7522a4fafb45d09a794b79d4c/numpy/core/setup.py", line 176, in check_math_capabilities
raise SystemError("One of the required function to build numpy is not"
SystemError: One of the required function to build numpy is not available (the list is ['sin', 'cos', 'tan', 'sinh', 'cosh', 'tanh', 'fabs', 'floor', 'ceil', 'sqrt', 'log10', 'log', 'exp', 'asin', 'acos', 'atan', 'fmod', 'modf', 'frexp', 'ldexp']).
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for numpy
Failed to build numpy
ERROR: Could not build wheels for numpy, which is required to install pyproject.toml-based projects
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
error: subprocess-exited-with-error
× pip subprocess to install build dependencies did not run successfully.
│ exit code: 1
╰─> See above for output.
note: This error originates from a subprocess, and is likely not a problem with pip.
~ $
Comment From: ansjayan
some libraries are missing. install missing libraries in os and try again.
INFO: libraries armpl_lp64_mp not found in ['/data/data/com.termux/files/usr/lib'] INFO: NOT AVAILABLE INFO: INFO: blas_mkl_info: INFO: libraries mkl_rt not found in ['/data/data/com.termux/files/usr/lib'] INFO: NOT AVAILABLE INFO: INFO: blis_info: INFO: libraries blis not found in ['/data/data/com.termux/files/usr/lib'] INFO: NOT AVAILABLE INFO:
Comment From: dclxviclan
python -m venv menv source menv/bin/activate pip install wheel MATHLIB="m" pip install numpy pip install pillow MATHLIB="m" pip install pandas
Comment From: phofl
Looks like a dependency issue, closing for now
Comment From: saalimzafar
(menv) ~ $ pip list Package Version
numpy 1.24.1 Pillow 9.4.0 pip 23.0 setuptools 65.5.0 wheel 0.38.4 (menv) ~ $ MATHLIB="m" pip install pandas Collecting pandas Using cached pandas-1.5.3.tar.gz (5.2 MB) Installing build dependencies ... done Getting requirements to build wheel ...
It's taking a lot of time!!! A lot!!! And still no positive result!!