SpringBoot Flyway fails to get loggers on native runs after upgrading to 3.1.0-RC1

Related to https://github.com/flyway/flyway/issues/3659

• Spring Boot 3.1.0-RC1
• Kotlin 1.8.20
• Gradle 8

Add flyway as a dependency, maybe directly on Spring Initalizr.

./gradlew nativeRun fails:

2023-04-23T10:53:26.257+02:00 ERROR 75122 --- [           main] o.s.boot.SpringApplication               : Application run failed

org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'flywayInitializer': null
        at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1770) ~[kotlin-spring-data-rest-movies:6.0.8]
        at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:598) ~[kotlin-spring-data-rest-movies:6.0.8]
        at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:520) ~[kotlin-spring-data-rest-movies:6.0.8]
        at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:326) ~[kotlin-spring-data-rest-movies:6.0.8]
        at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:234) ~[kotlin-spring-data-rest-movies:6.0.8]
        at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:324) ~[kotlin-spring-data-rest-movies:6.0.8]
        at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:200) ~[kotlin-spring-data-rest-movies:6.0.8]
        at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:313) ~[kotlin-spring-data-rest-movies:6.0.8]
        at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:200) ~[kotlin-spring-data-rest-movies:6.0.8]
        at org.springframework.context.support.AbstractApplicationContext.getBean(AbstractApplicationContext.java:1132) ~[kotlin-spring-data-rest-movies:6.0.8]
        at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:907) ~[kotlin-spring-data-rest-movies:6.0.8]
        at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:584) ~[kotlin-spring-data-rest-movies:6.0.8]
        at org.springframework.boot.web.servlet.context.ServletWebServerApplicationContext.refresh(ServletWebServerApplicationContext.java:146) ~[kotlin-spring-data-rest-movies:3.1.0-RC1]
        at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:733) ~[kotlin-spring-data-rest-movies:3.1.0-RC1]
        at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:435) ~[kotlin-spring-data-rest-movies:3.1.0-RC1]
        at org.springframework.boot.SpringApplication.run(SpringApplication.java:311) ~[kotlin-spring-data-rest-movies:3.1.0-RC1]
        at org.springframework.boot.SpringApplication.run(SpringApplication.java:1305) ~[kotlin-spring-data-rest-movies:3.1.0-RC1]
        at org.springframework.boot.SpringApplication.run(SpringApplication.java:1294) ~[kotlin-spring-data-rest-movies:3.1.0-RC1]
        at tech.aaregall.lab.movies.AppKt.main(App.kt:13) ~[kotlin-spring-data-rest-movies:na]
Caused by: java.lang.ExceptionInInitializerError: null
        at org.apache.logging.log4j.LogManager.<clinit>(LogManager.java:61) ~[na:na]
        at org.flywaydb.core.internal.logging.log4j2.Log4j2LogCreator.createLogger(Log4j2LogCreator.java:24) ~[kotlin-spring-data-rest-movies:na]
        at org.flywaydb.core.internal.logging.multi.MultiLogCreator.createLogger(MultiLogCreator.java:34) ~[na:na]
        at org.flywaydb.core.api.logging.LogFactory.getLog(LogFactory.java:89) ~[na:na]
        at org.flywaydb.core.internal.license.VersionPrinter.<clinit>(VersionPrinter.java:27) ~[na:na]
        at org.flywaydb.core.FlywayExecutor.execute(FlywayExecutor.java:121) ~[na:na]
        at org.flywaydb.core.Flyway.migrate(Flyway.java:140) ~[kotlin-spring-data-rest-movies:na]
        at org.springframework.boot.autoconfigure.flyway.FlywayMigrationInitializer.afterPropertiesSet(FlywayMigrationInitializer.java:66) ~[kotlin-spring-data-rest-movies:na]
        at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1816) ~[kotlin-spring-data-rest-movies:6.0.8]
        at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1766) ~[kotlin-spring-data-rest-movies:6.0.8]
        ... 18 common frames omitted
Caused by: java.lang.IllegalStateException: java.lang.InstantiationException: org.apache.logging.log4j.message.DefaultFlowMessageFactory
        at org.apache.logging.log4j.spi.AbstractLogger.createDefaultFlowMessageFactory(AbstractLogger.java:242) ~[kotlin-spring-data-rest-movies:2.20.0]
        at org.apache.logging.log4j.spi.AbstractLogger.<init>(AbstractLogger.java:141) ~[kotlin-spring-data-rest-movies:2.20.0]
        at org.apache.logging.log4j.status.StatusLogger.<init>(StatusLogger.java:141) ~[na:na]
        at org.apache.logging.log4j.status.StatusLogger.<clinit>(StatusLogger.java:91) ~[na:na]
        ... 28 common frames omitted
Caused by: java.lang.InstantiationException: org.apache.logging.log4j.message.DefaultFlowMessageFactory
        at java.base@17.0.5/java.lang.Class.newInstance(DynamicHub.java:639) ~[kotlin-spring-data-rest-movies:na]
        at org.apache.logging.log4j.spi.AbstractLogger.createDefaultFlowMessageFactory(AbstractLogger.java:240) ~[kotlin-spring-data-rest-movies:2.20.0]
        ... 31 common frames omitted
Caused by: java.lang.NoSuchMethodException: org.apache.logging.log4j.message.DefaultFlowMessageFactory.<init>()
        at java.base@17.0.5/java.lang.Class.getConstructor0(DynamicHub.java:3585) ~[kotlin-spring-data-rest-movies:na]
        at java.base@17.0.5/java.lang.Class.newInstance(DynamicHub.java:626) ~[kotlin-spring-data-rest-movies:na]
        ... 32 common frames omitted

Comment From: wilkinsona

Thanks for the report but this should either be addressed in Flyway itself or, more likely, by updating the reachability metadata for Flyway.

Comment From: wilkinsona

https://github.com/flyway/flyway/issues/3651 is tracking this problem. It can be worked around by configuring the loggers to use, thereby avoiding Flyway's faulty auto-detection logic:

@Bean
FlywayConfigurationCustomizer flywayLoggersCustomizer() {
    return (configuration) -> configuration.loggers("slf4j");
}